diff options
author | Aaron Bauman <bman@gentoo.org> | 2020-07-27 22:33:32 -0400 |
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committer | Aaron Bauman <bman@gentoo.org> | 2020-07-27 22:33:32 -0400 |
commit | f63396228c129fdbac0b2b6bf90ca0dbe64bfb08 (patch) | |
tree | 7f870e5b96903f3fd9ebe72e4da5188f7092f94d /sci-libs/chemkit/files | |
parent | app-misc/OpenRGB-0.3-r1: Revbump, add udev USE flag to install udev rules (diff) | |
download | gentoo-f63396228c129fdbac0b2b6bf90ca0dbe64bfb08.tar.gz gentoo-f63396228c129fdbac0b2b6bf90ca0dbe64bfb08.tar.bz2 gentoo-f63396228c129fdbac0b2b6bf90ca0dbe64bfb08.zip |
*/*: Drop last-rited Py2 only pkgs
Bug: https://bugs.gentoo.org/616064
Closes: https://bugs.gentoo.org/721904
Closes: https://bugs.gentoo.org/609686
Closes: https://bugs.gentoo.org/695016
Closes: https://bugs.gentoo.org/722616
Closes: https://bugs.gentoo.org/684098
Closes: https://bugs.gentoo.org/672164
Closes: https://bugs.gentoo.org/699136
Closes: https://bugs.gentoo.org/690776
Closes: https://bugs.gentoo.org/695912
Closes: https://bugs.gentoo.org/697004
Closes: https://bugs.gentoo.org/711026
Signed-off-by: Aaron Bauman <bman@gentoo.org>
Diffstat (limited to 'sci-libs/chemkit/files')
-rw-r--r-- | sci-libs/chemkit/files/chemkit-0.1-multilib.patch | 90 | ||||
-rw-r--r-- | sci-libs/chemkit/files/chemkit-0.1-unbundle.patch | 191 |
2 files changed, 0 insertions, 281 deletions
diff --git a/sci-libs/chemkit/files/chemkit-0.1-multilib.patch b/sci-libs/chemkit/files/chemkit-0.1-multilib.patch deleted file mode 100644 index b6a61d58ed8c..000000000000 --- a/sci-libs/chemkit/files/chemkit-0.1-multilib.patch +++ /dev/null @@ -1,90 +0,0 @@ -diff --git a/CMakeLists.txt b/CMakeLists.txt -index e531be4..e0d6b2d 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -44,7 +44,7 @@ configure_file( - "${CMAKE_MODULE_PATH}/ChemkitConfig.cmake.in" - "${CMAKE_BINARY_DIR}/ChemkitConfig.cmake" - IMMEDIATE @ONLY) --install(FILES ${CMAKE_BINARY_DIR}/ChemkitConfig.cmake DESTINATION lib/chemkit) -+install(FILES ${CMAKE_BINARY_DIR}/ChemkitConfig.cmake DESTINATION lib${LIB_SUFFIX}/chemkit) - - # Create a ChemkitBuildTreeSettings.cmake file for the use from the build tree - configure_file( -diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt -index 88c6b5f..1100c3b 100644 ---- a/src/CMakeLists.txt -+++ b/src/CMakeLists.txt -@@ -8,12 +8,12 @@ macro(add_chemkit_library library_name) - add_library(${library_name} SHARED ${ARGN}) - - # add install target -- install(TARGETS ${library_name} DESTINATION lib) -+ install(TARGETS ${library_name} DESTINATION lib${LIB_SUFFIX}) - - # copy library into build directory - get_target_property(library_location ${library_name} LOCATION) - get_filename_component(library_filename ${library_location} NAME) -- add_custom_command(TARGET ${library_name} POST_BUILD COMMAND ${CMAKE_COMMAND} ARGS -E copy ${library_location} ${CMAKE_BINARY_DIR}/lib/${library_filename}) -+ add_custom_command(TARGET ${library_name} POST_BUILD COMMAND ${CMAKE_COMMAND} ARGS -E copy ${library_location} ${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}/${library_filename}) - - endmacro(add_chemkit_library) - -diff --git a/src/plugins/CMakeLists.txt b/src/plugins/CMakeLists.txt -index dc8970f..77029b7 100644 ---- a/src/plugins/CMakeLists.txt -+++ b/src/plugins/CMakeLists.txt -@@ -3,7 +3,7 @@ macro(add_chemkit_plugin plugin_name) - add_library(${plugin_name} SHARED ${ARGN}) - - # add install target -- install(TARGETS ${plugin_name} DESTINATION lib/chemkit/plugins/) -+ install(TARGETS ${plugin_name} DESTINATION lib${LIB_SUFFIX}/chemkit/plugins/) - - # remove 'lib' prefix - set_target_properties(${plugin_name} PROPERTIES PREFIX "") -@@ -11,15 +11,15 @@ macro(add_chemkit_plugin plugin_name) - # copy plugin into build directory - get_target_property(plugin_location ${plugin_name} LOCATION) - get_filename_component(plugin_filename ${plugin_location} NAME) -- add_custom_command(TARGET ${plugin_name} POST_BUILD COMMAND ${CMAKE_COMMAND} ARGS -E copy ${plugin_location} ${CMAKE_BINARY_DIR}/lib/chemkit/plugins/${plugin_filename}) -+ add_custom_command(TARGET ${plugin_name} POST_BUILD COMMAND ${CMAKE_COMMAND} ARGS -E copy ${plugin_location} ${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}/chemkit/plugins/${plugin_filename}) - - # plugin data - if(EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/data) - # copy plugin data into build directory -- file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/data/ DESTINATION ${CMAKE_BINARY_DIR}/lib/chemkit/plugins/data/${plugin_name}/) -+ file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/data/ DESTINATION ${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}/chemkit/plugins/data/${plugin_name}/) - - # install plugin data directory -- install(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/data/ DESTINATION lib/chemkit/plugins/data/${plugin_name}) -+ install(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/data/ DESTINATION lib${LIB_SUFFIX}/chemkit/plugins/data/${plugin_name}) - endif() - endmacro(add_chemkit_plugin) - -diff --git a/tests/CMakeLists.txt b/tests/CMakeLists.txt -index b191b82..a4ea0b0 100644 ---- a/tests/CMakeLists.txt -+++ b/tests/CMakeLists.txt -@@ -4,7 +4,7 @@ endif() - - macro(add_chemkit_test test_name test_executable) - add_test(NAME ${test_name} COMMAND ${test_executable}) -- set_tests_properties(${test_name} PROPERTIES ENVIRONMENT "CHEMKIT_PLUGIN_PATH=${CMAKE_BINARY_DIR}/lib/chemkit/plugins/") -+ set_tests_properties(${test_name} PROPERTIES ENVIRONMENT "CHEMKIT_PLUGIN_PATH=${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}/chemkit/plugins/") - endmacro(add_chemkit_test) - - add_subdirectory(auto) -diff --git a/tests/auto/bindings/python/CMakeLists.txt b/tests/auto/bindings/python/CMakeLists.txt -index 9859867..70da693 100644 ---- a/tests/auto/bindings/python/CMakeLists.txt -+++ b/tests/auto/bindings/python/CMakeLists.txt -@@ -5,7 +5,7 @@ endif() - macro(add_chemkit_python_test test_name test_script) - add_test(${test_name} ${PYTHON_EXECUTABLE} ${test_script}) - set_tests_properties(${test_name} PROPERTIES -- ENVIRONMENT "PYTHONPATH=${CMAKE_BINARY_DIR}/bindings/python/;CHEMKIT_PLUGIN_PATH=${CMAKE_BINARY_DIR}/lib/chemkit/plugins") -+ ENVIRONMENT "PYTHONPATH=${CMAKE_BINARY_DIR}/bindings/python/;CHEMKIT_PLUGIN_PATH=${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}/chemkit/plugins") - endmacro(add_chemkit_python_test) - - add_chemkit_python_test(python.Atom ${CMAKE_CURRENT_SOURCE_DIR}/atomtest.py) diff --git a/sci-libs/chemkit/files/chemkit-0.1-unbundle.patch b/sci-libs/chemkit/files/chemkit-0.1-unbundle.patch deleted file mode 100644 index e8c9d18dca6e..000000000000 --- a/sci-libs/chemkit/files/chemkit-0.1-unbundle.patch +++ /dev/null @@ -1,191 +0,0 @@ - CMakeLists.txt | 21 +++++++++++++++++++++ - src/plugins/chemjson/CMakeLists.txt | 6 +++++- - src/plugins/chemjson/chemjsonfileformat.cpp | 4 ++++ - src/plugins/cml/cmlfileformat.h | 4 ++++ - src/plugins/inchi/CMakeLists.txt | 4 +++- - src/plugins/inchi/inchikeylineformat.cpp | 4 ++++ - src/plugins/inchi/inchilineformat.cpp | 4 ++++ - src/plugins/pdb/pdbmlfileformat.cpp | 4 ++++ - src/plugins/xtc/CMakeLists.txt | 9 +++++++-- - src/plugins/xtc/xtcfileformat.cpp | 4 ++++ - 10 files changed, 60 insertions(+), 4 deletions(-) - -diff --git a/CMakeLists.txt b/CMakeLists.txt -index e531be4..622ea9d 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -55,6 +55,27 @@ configure_file( - # export the Chemkit package - export(PACKAGE Chemkit) - -+option(USE_SYSTEM_INCHI "Use inchi installed in system" OFF) -+option(USE_SYSTEM_JSONCPP "Use json cpp installed in system" OFF) -+option(USE_SYSTEM_RAPIXML "Use rapidxml installed in system" OFF) -+option(USE_SYSTEM_XDRF "Use xdrflib installed in system" OFF) -+ -+if(USE_SYSTEM_INCHI) -+ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DSYSTEM_INCHI") -+endif() -+ -+if(USE_SYSTEM_JSONCPP) -+ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DSYSTEM_JSONCPP") -+endif() -+ -+if(USE_SYSTEM_RAPIDXML) -+ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DSYSTEM_RAPIDXML") -+endif() -+ -+if(USE_SYSTEM_XDRF) -+ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DSYSTEM_XDRF") -+endif() -+ - # build options - option(CHEMKIT_WITH_GRAPHICS "Build the chemkit-graphics library." ON) - option(CHEMKIT_WITH_IO "Build the chemkit-io library." ON) -diff --git a/src/plugins/chemjson/CMakeLists.txt b/src/plugins/chemjson/CMakeLists.txt -index 0e115b5..a5e6f48 100644 ---- a/src/plugins/chemjson/CMakeLists.txt -+++ b/src/plugins/chemjson/CMakeLists.txt -@@ -10,7 +10,11 @@ set(SOURCES - chemjsonplugin.cpp - ) - --aux_source_directory(../../3rdparty/jsoncpp/ JSONCPP_SOURCES) -+if(NOT USE_SYSTEM_JSONCPP) -+ aux_source_directory(../../3rdparty/jsoncpp/ JSONCPP_SOURCES) -+else() -+ target_link_libraries(chemjson jsoncpp) -+endif() - - add_chemkit_plugin(chemjson ${SOURCES} ${JSONCPP_SOURCES}) - target_link_libraries(chemjson ${CHEMKIT_LIBRARIES}) -diff --git a/src/plugins/chemjson/chemjsonfileformat.cpp b/src/plugins/chemjson/chemjsonfileformat.cpp -index a0d271e..3cd5827 100644 ---- a/src/plugins/chemjson/chemjsonfileformat.cpp -+++ b/src/plugins/chemjson/chemjsonfileformat.cpp -@@ -43,7 +43,11 @@ - #include <chemkit/molecule.h> - #include <chemkit/moleculefile.h> - -+#ifdef SYSTEM_JSONCPP -+#include <jsoncpp/json/json.h> -+#else - #include "../../3rdparty/jsoncpp/json/json.h" -+#endif - - namespace { - -diff --git a/src/plugins/cml/cmlfileformat.h b/src/plugins/cml/cmlfileformat.h -index e813223..61a547d 100644 ---- a/src/plugins/cml/cmlfileformat.h -+++ b/src/plugins/cml/cmlfileformat.h -@@ -38,7 +38,11 @@ - - #include <chemkit/moleculefileformat.h> - -+#ifdef SYSTEM_RAPIDXML -+#include <rapidxml/rapidxml.hpp> -+#else - #include "../../3rdparty/rapidxml/rapidxml.hpp" -+#endif - - class CmlFileFormat : public chemkit::MoleculeFileFormat - { -diff --git a/src/plugins/inchi/CMakeLists.txt b/src/plugins/inchi/CMakeLists.txt -index 2b25d9b..5f45f8a 100644 ---- a/src/plugins/inchi/CMakeLists.txt -+++ b/src/plugins/inchi/CMakeLists.txt -@@ -7,7 +7,9 @@ set(SOURCES - inchiplugin.cpp - ) - --aux_source_directory(../../3rdparty/inchi/ IUPAC_INCHI_SOURCES) -+if(NOT USE_SYSTEM_INCHI) -+ aux_source_directory(../../3rdparty/inchi/ IUPAC_INCHI_SOURCES) -+endif() - - add_chemkit_plugin(inchi ${SOURCES} ${IUPAC_INCHI_SOURCES}) - target_link_libraries(inchi ${CHEMKIT_LIBRARIES}) -diff --git a/src/plugins/inchi/inchikeylineformat.cpp b/src/plugins/inchi/inchikeylineformat.cpp -index 2682f95..cec0a17 100644 ---- a/src/plugins/inchi/inchikeylineformat.cpp -+++ b/src/plugins/inchi/inchikeylineformat.cpp -@@ -38,7 +38,11 @@ - #include <boost/format.hpp> - - #include "inchilineformat.h" -+#ifdef SYSTEM_INCHI -+#include <inchi_api.h> -+#else - #include "../../3rdparty/inchi/inchi_api.h" -+#endif - - InchiKeyLineFormat::InchiKeyLineFormat() - : chemkit::LineFormat("inchikey") -diff --git a/src/plugins/inchi/inchilineformat.cpp b/src/plugins/inchi/inchilineformat.cpp -index 5b9bc42..ea5977c 100644 ---- a/src/plugins/inchi/inchilineformat.cpp -+++ b/src/plugins/inchi/inchilineformat.cpp -@@ -42,7 +42,11 @@ - - #include <boost/algorithm/string.hpp> - -+#ifdef SYSTEM_INCHI -+#include <inchi_api.h> -+#else - #include "../../3rdparty/inchi/inchi_api.h" -+#endif - - #include <chemkit/atom.h> - #include <chemkit/bond.h> -diff --git a/src/plugins/pdb/pdbmlfileformat.cpp b/src/plugins/pdb/pdbmlfileformat.cpp -index 081a4ec..2ca4269 100644 ---- a/src/plugins/pdb/pdbmlfileformat.cpp -+++ b/src/plugins/pdb/pdbmlfileformat.cpp -@@ -35,7 +35,11 @@ - - #include "pdbmlfileformat.h" - -+#ifdef SYSTEM_RAPIDXML -+#include <rapidxml/rapidxml.hpp> -+#else - #include "../../3rdparty/rapidxml/rapidxml.hpp" -+#endif - - #include <chemkit/atom.h> - #include <chemkit/polymer.h> -diff --git a/src/plugins/xtc/CMakeLists.txt b/src/plugins/xtc/CMakeLists.txt -index 98d8ba7..8c09e64 100644 ---- a/src/plugins/xtc/CMakeLists.txt -+++ b/src/plugins/xtc/CMakeLists.txt -@@ -13,7 +13,12 @@ set(SOURCES - xtcplugin.cpp - ) - --aux_source_directory(../../3rdparty/xdrf/ XDRF_SOURCES) -+ -+if(USE_SYSTEM_XDRF) -+ find_library(XDRF_LIBRARY NAMES xdrfile libxdrfile) -+else() -+ aux_source_directory(../../3rdparty/xdrf/ XDRF_SOURCES) -+endif() - - add_chemkit_plugin(xtc ${SOURCES} ${XDRF_SOURCES}) --target_link_libraries(xtc ${CHEMKIT_LIBRARIES} ${Boost_LIBRARIES}) -+target_link_libraries(xtc ${CHEMKIT_LIBRARIES} ${Boost_LIBRARIES} ${XDRF_LIBRARY} ) -diff --git a/src/plugins/xtc/xtcfileformat.cpp b/src/plugins/xtc/xtcfileformat.cpp -index 0f00cb6..f8659ca 100644 ---- a/src/plugins/xtc/xtcfileformat.cpp -+++ b/src/plugins/xtc/xtcfileformat.cpp -@@ -47,7 +47,11 @@ - #include <chemkit/trajectoryframe.h> - #include <chemkit/cartesiancoordinates.h> - -+#ifdef SYSTEM_XDRF -+#include <xdrfile/xdrfile.h> -+#else - #include "../../3rdparty/xdrf/xdrf.h" -+#endif - - XtcFileFormat::XtcFileFormat() - : chemkit::TrajectoryFileFormat("xtc") |