1 files changed, 0 insertions, 40 deletions
diff --git a/sci-biology/biopython/files/biopython-1.65-test-fix-backport.patch b/sci-biology/biopython/files/biopython-1.65-test-fix-backport.patch
deleted file mode 100644
index 2efdef97d799..000000000000
--- a/sci-biology/biopython/files/biopython-1.65-test-fix-backport.patch
+++ /dev/null
@@ -1,40 +0,0 @@
-From 08c72f8778a87701586a03dffcce33c7589bc6d7 Mon Sep 17 00:00:00 2001
-From: Peter Cock <p.j.a.cock@googlemail.com>
-Date: Sun, 18 Jan 2015 02:07:54 +0000
-Subject: [PATCH] Clearer error message; update failing test.
-
-One of the orchid examples now returns different enough
-results that the test was failing. The new error message
-makes it much easier to pick another positive example to
-add to the the white-list.
----
- Tests/test_NCBI_qblast.py | 9 +++++----
- 1 file changed, 5 insertions(+), 4 deletions(-)
-
-diff --git a/Tests/test_NCBI_qblast.py b/Tests/test_NCBI_qblast.py
-index 88bfe61..19f7b35 100644
---- a/Tests/test_NCBI_qblast.py
-+++ b/Tests/test_NCBI_qblast.py
-@@ -66,7 +66,7 @@ def test_orchid_est(self):
-                         AGCCATGGATTTCTCAGAAGAAAATGATTATACTTCTTAATCAGGCAACTGATATTATCAATTTATGGCA
-                         GCAGAGTGGTGGCTCCTTGTCCCAGCAGCAGTAATTACTTTTTTTTCTCTTTTTGTTTCCAAATTAAGAA
-                         ACATTAGTATCATATGGCTATTTGCTCAATTGCAGATTTCTTTCTTTTGTGAATG""",
--                        0.0000001, None, ["21554275", "18409071", "296087288"])
-+                        0.0000001, None, ["21554275", "18409071", "296087288", "566183510"])
- 
-     def run_qblast(self, program, database, query, e_value, entrez_filter, expected_hits):
-         try:
-@@ -120,9 +120,10 @@ def run_qblast(self, program, database, query, e_value, entrez_filter, expected_
-                 print("Update this test to have some redundancy...")
-                 for alignment in record.alignments:
-                     print(alignment.hit_id)
--            assert found_result, "Missing all of %s in alignments" \
--                % ", ".join(expected_hits)
--            self.assertTrue(found_result)
-+            self.assertTrue(found_result,
-+                            "Missing all expected hits (%s), instead have: %s"
-+                            % (", ".join(expected_hits),
-+                               ", ".join(a.hit_id for a in record.alignments)))
- 
-         # Check the expected result(s) are found in the descriptions
-         if expected_hits is None: