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Diffstat (limited to 'sci-biology/bowtie/bowtie-1.0.0.ebuild')
-rw-r--r--sci-biology/bowtie/bowtie-1.0.0.ebuild42
1 files changed, 0 insertions, 42 deletions
diff --git a/sci-biology/bowtie/bowtie-1.0.0.ebuild b/sci-biology/bowtie/bowtie-1.0.0.ebuild
deleted file mode 100644
index b8181190243c..000000000000
--- a/sci-biology/bowtie/bowtie-1.0.0.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-inherit eutils toolchain-funcs
-
-DESCRIPTION="An ultrafast memory-efficient short read aligner"
-HOMEPAGE="http://bowtie-bio.sourceforge.net/"
-SRC_URI="mirror://sourceforge/bowtie-bio/${P}-src.zip"
-
-LICENSE="Artistic"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86 ~x64-macos"
-
-DEPEND="app-arch/unzip"
-RDEPEND=""
-
-src_compile() {
- unset CFLAGS
- emake \
- CC="$(tc-getCC)" \
- CPP="$(tc-getCXX)" \
- CXX="$(tc-getCXX)" \
- EXTRA_FLAGS="${LDFLAGS}" \
- RELEASE_FLAGS="${CXXFLAGS}"
-}
-
-src_install() {
- dobin bowtie bowtie-*
- exeinto /usr/share/${PN}/scripts
- doexe scripts/*
-
- insinto /usr/share/${PN}
- doins -r genomes indexes
-
- newman MANUAL bowtie.1
- dodoc AUTHORS NEWS TUTORIAL doc/README
- dohtml doc/{manual.html,style.css}
-}