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Diffstat (limited to 'sci-biology/hmmer/hmmer-3.0.ebuild')
-rw-r--r--sci-biology/hmmer/hmmer-3.0.ebuild45
1 files changed, 0 insertions, 45 deletions
diff --git a/sci-biology/hmmer/hmmer-3.0.ebuild b/sci-biology/hmmer/hmmer-3.0.ebuild
deleted file mode 100644
index 86183e7f9d3a..000000000000
--- a/sci-biology/hmmer/hmmer-3.0.ebuild
+++ /dev/null
@@ -1,45 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit eutils
-
-DESCRIPTION="Sequence analysis using profile hidden Markov models"
-HOMEPAGE="http://hmmer.janelia.org/"
-SRC_URI="ftp://selab.janelia.org/pub/software/hmmer3/${PV}/${P}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE="+cpu_flags_x86_sse mpi +threads gsl static-libs"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux ~ppc-macos"
-
-DEPEND="
- mpi? ( virtual/mpi )
- gsl? ( >=sci-libs/gsl-1.12 )"
-RDEPEND="${DEPEND}"
-
-src_prepare() {
- epatch \
- "${FILESDIR}"/${P}-fix_tests.patch \
- "${FILESDIR}"/${P}-perl-5.16-2.patch
-}
-
-src_configure() {
- econf \
- $(use_enable cpu_flags_x86_sse sse) \
- $(use_enable mpi) \
- $(use_enable threads) \
- $(use_with gsl)
-}
-
-src_install() {
- default
-
- use static-libs && dolib.a src/libhmmer.a easel/libeasel.a
-
- insinto /usr/share/${PN}
- doins -r tutorial
- dodoc Userguide.pdf
-}