3 files changed, 0 insertions, 84 deletions
diff --git a/sci-biology/mummer/files/3.22-ldflags.patch b/sci-biology/mummer/files/3.22-ldflags.patch
deleted file mode 100644
index d3c4a60a1adb..000000000000
--- a/sci-biology/mummer/files/3.22-ldflags.patch
+++ /dev/null
@@ -1,16 +0,0 @@
-diff --git a/src/tigr/Makefile b/src/tigr/Makefile
-index cf6b9ca..5b28d1e 100644
---- a/src/tigr/Makefile
-+++ b/src/tigr/Makefile
-@@ -9,9 +9,9 @@ AUX_BIN_DIR := $(CURDIR)
- endif
- 
- OBJ_RULE = $(CXX) $(CXXFLAGS) $< -c -o $@
--BIN_RULE = $(CXX) $(CXXFLAGS) $^ -o $(BIN_DIR)/$@; \
-+BIN_RULE = $(CXX) $(LDFLAGS) $(CXXFLAGS) $^ -o $(BIN_DIR)/$@; \
-            chmod 755 $(BIN_DIR)/$@
--AUX_BIN_RULE = $(CXX) $(CXXFLAGS) $^ -o $(AUX_BIN_DIR)/$@; \
-+AUX_BIN_RULE = $(CXX) $(LDFLAGS) $(CXXFLAGS) $^ -o $(AUX_BIN_DIR)/$@; \
-            chmod 755 $(AUX_BIN_DIR)/$@
- VPATH := $(AUX_BIN_DIR):$(BIN_DIR)
- 
diff --git a/sci-biology/mummer/files/3.22-prll.patch b/sci-biology/mummer/files/3.22-prll.patch
deleted file mode 100644
index 3b24ee40214a..000000000000
--- a/sci-biology/mummer/files/3.22-prll.patch
+++ /dev/null
@@ -1,56 +0,0 @@
-diff --git a/Makefile b/Makefile
-index 4db4977..bbd00ed 100644
---- a/Makefile
-+++ b/Makefile
-@@ -114,15 +114,15 @@ install: all
- 
- 
- kurtz:
--	cd $(KURTZ_SRC_DIR); $(MAKE) mummer
-+	$(MAKE) -C $(KURTZ_SRC_DIR) mummer
- 
- 
- scripts:
--	cd $(SCRIPT_DIR); $(MAKE) all
-+	$(MAKE) -C $(SCRIPT_DIR) all
- 
- 
- tigr:
--	cd $(TIGR_SRC_DIR); $(MAKE) all
-+	$(MAKE) -C $(TIGR_SRC_DIR) all
- 
- 
- uninstall: clean
-diff --git a/src/kurtz/Makefile b/src/kurtz/Makefile
-index 85dfc16..5bff793 100644
---- a/src/kurtz/Makefile
-+++ b/src/kurtz/Makefile
-@@ -1,7 +1,7 @@
- all:
--	cd libbasedir; $(MAKE) all
--	cd streesrc; $(MAKE) all
--	cd mm3src; $(MAKE) all
-+	$(MAKE) -C libbasedir all
-+	$(MAKE) -C streesrc all
-+	$(MAKE) -C mm3src all
- 
- clean:
- 	rm -f *~
-@@ -10,11 +10,11 @@ clean:
- 	cd mm3src; $(MAKE) clean
- 
- mummer:
--	cd libbasedir; $(MAKE) libbase.a
--	cd streesrc; $(MAKE) libstree.a
--	cd mm3src; $(MAKE) mummer
-+	$(MAKE) -C libbasedir libbase.a
-+	$(MAKE) -C streesrc libstree.a
-+	$(MAKE) -C mm3src mummer
- 
- splintall:
--	cd libbasedir; ${MAKE} splintall
--	cd streesrc; ${MAKE} splintall
--	cd mm3src; ${MAKE} splintall
-+	$(MAKE) -C libbasedir splintall
-+	$(MAKE) -C streesrc splintall
-+	$(MAKE) -C mm3src splintall
diff --git a/sci-biology/mummer/files/mummer-3.20-gcc43.patch b/sci-biology/mummer/files/mummer-3.20-gcc43.patch
deleted file mode 100644
index 4d3edb41e46a..000000000000
--- a/sci-biology/mummer/files/mummer-3.20-gcc43.patch
+++ /dev/null
@@ -1,12 +0,0 @@
---- src/tigr/show-diff.cc.orig	2008-06-16 17:55:34.000000000 +0000
-+++ src/tigr/show-diff.cc	2008-06-16 17:56:25.000000000 +0000
-@@ -14,6 +14,8 @@
- #include <cstdlib>
- #include <cassert>
- #include <climits>
-+#include <algorithm>
-+
- using namespace std;
- 
- 
-