1 files changed, 0 insertions, 40 deletions
diff --git a/sci-biology/pysam/files/pysam-0.9.0-missing-config.h.patch b/sci-biology/pysam/files/pysam-0.9.0-missing-config.h.patch
deleted file mode 100644
index 617786a5a586..000000000000
--- a/sci-biology/pysam/files/pysam-0.9.0-missing-config.h.patch
+++ /dev/null
@@ -1,40 +0,0 @@
-From 55f5d8ce51ad999123a779f31fcf0fecd60de9e6 Mon Sep 17 00:00:00 2001
-From: Andreas Heger <andreas.heger@gmail.com>
-Date: Mon, 21 Mar 2016 21:10:04 +0000
-Subject: [PATCH] {AH} create empty config.h for samtools if it does not exist,
- fixes #245
-
----
- setup.py | 12 +++++++++++-
- 1 file changed, 11 insertions(+), 1 deletion(-)
-
-diff --git a/setup.py b/setup.py
-index 7b59b69..2f00c37 100644
---- a/setup.py
-+++ b/setup.py
-@@ -155,7 +155,7 @@ def run_configure(option):
-             outf.write(
-                 "/* empty config.h created by pysam */\n")
-             outf.write(
--                "/* conservative compilation options */")
-+                "/* conservative compilation options */\n")
- 
- if HTSLIB_LIBRARY_DIR:
-     # linking against a shared, externally installed htslib version, no
-@@ -259,6 +259,16 @@ def run_configure(option):
-                "adding shared libcurl and libcrypto")
-         external_htslib_libraries.extend(["curl", "crypto"])
- 
-+# create empty config.h files if they have not been created automatically
-+# or created by the user:
-+for fn in "samtools/config.h", "htslib/config.h":
-+    if not os.path.exists(fn):
-+        with open(fn, "w") as outf:
-+            outf.write(
-+                "/* empty config.h created by pysam */\n")
-+            outf.write(
-+                "/* conservative compilation options */\n")
-+
- parts = ["samtools",
-          "bcftools",
-          "htslib",