diff options
Diffstat (limited to 'sci-biology')
150 files changed, 612 insertions, 153 deletions
diff --git a/sci-biology/GBrowse/metadata.xml b/sci-biology/GBrowse/metadata.xml index 32b15c723f9d..dd5b8c1f2520 100644 --- a/sci-biology/GBrowse/metadata.xml +++ b/sci-biology/GBrowse/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> <upstream> <remote-id type="cpan">GBrowse</remote-id> </upstream> diff --git a/sci-biology/aaindex/metadata.xml b/sci-biology/aaindex/metadata.xml index ccb567e64e02..0b81292dee88 100644 --- a/sci-biology/aaindex/metadata.xml +++ b/sci-biology/aaindex/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Amino acid indices and similarity matrices maintained at Kyoto University. An amino acid index is a set of 20 numerical values diff --git a/sci-biology/abyss/metadata.xml b/sci-biology/abyss/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/abyss/metadata.xml +++ b/sci-biology/abyss/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/allpathslg/metadata.xml b/sci-biology/allpathslg/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/allpathslg/metadata.xml +++ b/sci-biology/allpathslg/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/amap/metadata.xml b/sci-biology/amap/metadata.xml index 34294c65ca04..33fe2f0e7ca6 100644 --- a/sci-biology/amap/metadata.xml +++ b/sci-biology/amap/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> </pkgmetadata> diff --git a/sci-biology/amos/metadata.xml b/sci-biology/amos/metadata.xml index a73ee9189a98..fb346f5febdd 100644 --- a/sci-biology/amos/metadata.xml +++ b/sci-biology/amos/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">amos</remote-id> </upstream> diff --git a/sci-biology/arb/metadata.xml b/sci-biology/arb/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/arb/metadata.xml +++ b/sci-biology/arb/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ariadne/metadata.xml b/sci-biology/ariadne/metadata.xml index 3e55c00f9d7b..5abaffad62e6 100644 --- a/sci-biology/ariadne/metadata.xml +++ b/sci-biology/ariadne/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> ARIADNE is a package of two programs, ariadne and prospero, that compare protein sequences and profiles using the Smith-Waterman diff --git a/sci-biology/augustus/metadata.xml b/sci-biology/augustus/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/augustus/metadata.xml +++ b/sci-biology/augustus/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bamtools/metadata.xml b/sci-biology/bamtools/metadata.xml index f2c00c1fdd0c..77ef447510c1 100644 --- a/sci-biology/bamtools/metadata.xml +++ b/sci-biology/bamtools/metadata.xml @@ -1,12 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <herd>proxy-maintainers</herd> <maintainer> <email>mmokrejs@gmail.com</email> <name>Martin Mokrejs</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <maintainer> + <email>proxy-maint@gentoo.org</email> + <name>Proxy Maintainers</name> + </maintainer> <longdescription>BAM (Binary Alignment/Map) format is useful for storing large DNA sequence alignments. It is closely related to the text-based SAM format, but optimized for random-access. BamTools provides a fast, flexible C++ API for reading and writing BAM files.</longdescription> <upstream> <remote-id type="github">pezmaster31/bamtools</remote-id> diff --git a/sci-biology/beast-mcmc/metadata.xml b/sci-biology/beast-mcmc/metadata.xml index 7764bf07c826..90166c061e0b 100644 --- a/sci-biology/beast-mcmc/metadata.xml +++ b/sci-biology/beast-mcmc/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="github">beast-dev/beast-mcmc</remote-id> </upstream> diff --git a/sci-biology/bedtools/metadata.xml b/sci-biology/bedtools/metadata.xml index 6edffa4a6dc3..7cdbc1cb1bfe 100644 --- a/sci-biology/bedtools/metadata.xml +++ b/sci-biology/bedtools/metadata.xml @@ -1,12 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <herd>proxy-maintainers</herd> <maintainer> <email>mmokrejs@gmail.com</email> <name>Martin Mokrejs</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <maintainer> + <email>proxy-maint@gentoo.org</email> + <name>Proxy Maintainers</name> + </maintainer> <longdescription> BEDTools: a flexible suite of utilities for comparing genomic features. </longdescription> diff --git a/sci-biology/bfast/metadata.xml b/sci-biology/bfast/metadata.xml index 45107864e217..6b84fb0e72ba 100644 --- a/sci-biology/bfast/metadata.xml +++ b/sci-biology/bfast/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">bfast</remote-id> </upstream> diff --git a/sci-biology/biogrep/metadata.xml b/sci-biology/biogrep/metadata.xml index d4648212cbad..71d4974b6dda 100644 --- a/sci-biology/biogrep/metadata.xml +++ b/sci-biology/biogrep/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/biojava/metadata.xml b/sci-biology/biojava/metadata.xml index 0a18364544e8..fd50d98599dc 100644 --- a/sci-biology/biojava/metadata.xml +++ b/sci-biology/biojava/metadata.xml @@ -1,6 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <herd>java</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +<maintainer> + <email>java@gentoo.org</email> + <name>Java</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/biopandas/metadata.xml b/sci-biology/biopandas/metadata.xml index c2ee060b99bc..8b559490c96f 100644 --- a/sci-biology/biopandas/metadata.xml +++ b/sci-biology/biopandas/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="pypi">BioPandas</remote-id> <maintainer status="unknown"> diff --git a/sci-biology/bioperl-db/metadata.xml b/sci-biology/bioperl-db/metadata.xml index 642468c809b7..c175ecb3d49f 100644 --- a/sci-biology/bioperl-db/metadata.xml +++ b/sci-biology/bioperl-db/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="cpan">BioPerl-DB</remote-id> </upstream> diff --git a/sci-biology/bioperl-network/metadata.xml b/sci-biology/bioperl-network/metadata.xml index 045af7cc6148..3102a0155387 100644 --- a/sci-biology/bioperl-network/metadata.xml +++ b/sci-biology/bioperl-network/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="cpan">BioPerl-Network</remote-id> </upstream> diff --git a/sci-biology/bioperl-run/metadata.xml b/sci-biology/bioperl-run/metadata.xml index f8c7078a2813..09980b2cce9d 100644 --- a/sci-biology/bioperl-run/metadata.xml +++ b/sci-biology/bioperl-run/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="cpan">BioPerl-Run</remote-id> </upstream> diff --git a/sci-biology/bioperl/metadata.xml b/sci-biology/bioperl/metadata.xml index 210ba364d45f..aeed8448672e 100644 --- a/sci-biology/bioperl/metadata.xml +++ b/sci-biology/bioperl/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="run">Install sci-biology/bioperl-run</flag> <flag name="network">Install sci-biology/bioperl-run</flag> diff --git a/sci-biology/biopython/metadata.xml b/sci-biology/biopython/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/biopython/metadata.xml +++ b/sci-biology/biopython/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bioruby/metadata.xml b/sci-biology/bioruby/metadata.xml index d4648212cbad..71d4974b6dda 100644 --- a/sci-biology/bioruby/metadata.xml +++ b/sci-biology/bioruby/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/biosql/metadata.xml b/sci-biology/biosql/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/biosql/metadata.xml +++ b/sci-biology/biosql/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/blat/metadata.xml +++ b/sci-biology/blat/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/blossoc/metadata.xml b/sci-biology/blossoc/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/blossoc/metadata.xml +++ b/sci-biology/blossoc/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bowtie/metadata.xml b/sci-biology/bowtie/metadata.xml index 6e56af71b3d1..8654e51c64f7 100644 --- a/sci-biology/bowtie/metadata.xml +++ b/sci-biology/bowtie/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">bowtie-bio</remote-id> </upstream> diff --git a/sci-biology/bwa/metadata.xml b/sci-biology/bwa/metadata.xml index 97a33fbf5c42..f32466d551c7 100644 --- a/sci-biology/bwa/metadata.xml +++ b/sci-biology/bwa/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">bio-bwa</remote-id> </upstream> diff --git a/sci-biology/cd-hit/metadata.xml b/sci-biology/cd-hit/metadata.xml index bd5607ab16b5..2fad5f23ef85 100644 --- a/sci-biology/cd-hit/metadata.xml +++ b/sci-biology/cd-hit/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> CD-HIT is a very widely used program for clustering and comparing large sets of protein or nucleotide sequences. CD-HIT is very fast and can handle diff --git a/sci-biology/clustal-omega/metadata.xml b/sci-biology/clustal-omega/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/clustal-omega/metadata.xml +++ b/sci-biology/clustal-omega/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/clustalw-mpi/metadata.xml b/sci-biology/clustalw-mpi/metadata.xml index ab9706172a69..77328aff54c1 100644 --- a/sci-biology/clustalw-mpi/metadata.xml +++ b/sci-biology/clustalw-mpi/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> <use> <flag name="mpi_njtree">Use MPI (as opposed to serial) code for computing neighbor-joining trees</flag> diff --git a/sci-biology/clustalw/metadata.xml b/sci-biology/clustalw/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/clustalw/metadata.xml +++ b/sci-biology/clustalw/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/clustalx/metadata.xml b/sci-biology/clustalx/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/clustalx/metadata.xml +++ b/sci-biology/clustalx/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/consed/metadata.xml b/sci-biology/consed/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/consed/metadata.xml +++ b/sci-biology/consed/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cufflinks/metadata.xml b/sci-biology/cufflinks/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/cufflinks/metadata.xml +++ b/sci-biology/cufflinks/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cutg/metadata.xml b/sci-biology/cutg/metadata.xml index 59b110912ca6..bd81d3edcae2 100644 --- a/sci-biology/cutg/metadata.xml +++ b/sci-biology/cutg/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Codon usage tables maintained at the Kazusa DNA Research Institute. Codon usage in individual genes has been calculated using the diff --git a/sci-biology/dialign-tx/metadata.xml b/sci-biology/dialign-tx/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/dialign-tx/metadata.xml +++ b/sci-biology/dialign-tx/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/dialign2/metadata.xml b/sci-biology/dialign2/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/dialign2/metadata.xml +++ b/sci-biology/dialign2/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/diya/metadata.xml b/sci-biology/diya/metadata.xml index d6b9de8b20a7..244e2acd0451 100644 --- a/sci-biology/diya/metadata.xml +++ b/sci-biology/diya/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">diyg</remote-id> </upstream> diff --git a/sci-biology/elph/metadata.xml b/sci-biology/elph/metadata.xml index 469879ba8f5b..3267c1d4d444 100644 --- a/sci-biology/elph/metadata.xml +++ b/sci-biology/elph/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing diff --git a/sci-biology/embassy-cbstools/metadata.xml b/sci-biology/embassy-cbstools/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-cbstools/metadata.xml +++ b/sci-biology/embassy-cbstools/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-clustalomega/metadata.xml b/sci-biology/embassy-clustalomega/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-clustalomega/metadata.xml +++ b/sci-biology/embassy-clustalomega/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-domainatrix/metadata.xml b/sci-biology/embassy-domainatrix/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-domainatrix/metadata.xml +++ b/sci-biology/embassy-domainatrix/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-domalign/metadata.xml b/sci-biology/embassy-domalign/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-domalign/metadata.xml +++ b/sci-biology/embassy-domalign/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-domsearch/metadata.xml b/sci-biology/embassy-domsearch/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-domsearch/metadata.xml +++ b/sci-biology/embassy-domsearch/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-emnu/metadata.xml b/sci-biology/embassy-emnu/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-emnu/metadata.xml +++ b/sci-biology/embassy-emnu/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-esim4/metadata.xml b/sci-biology/embassy-esim4/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-esim4/metadata.xml +++ b/sci-biology/embassy-esim4/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-hmmer/metadata.xml b/sci-biology/embassy-hmmer/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-hmmer/metadata.xml +++ b/sci-biology/embassy-hmmer/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-iprscan/metadata.xml b/sci-biology/embassy-iprscan/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-iprscan/metadata.xml +++ b/sci-biology/embassy-iprscan/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-meme/metadata.xml b/sci-biology/embassy-meme/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-meme/metadata.xml +++ b/sci-biology/embassy-meme/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-mse/metadata.xml b/sci-biology/embassy-mse/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-mse/metadata.xml +++ b/sci-biology/embassy-mse/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-phylipnew/metadata.xml b/sci-biology/embassy-phylipnew/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-phylipnew/metadata.xml +++ b/sci-biology/embassy-phylipnew/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-signature/metadata.xml b/sci-biology/embassy-signature/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-signature/metadata.xml +++ b/sci-biology/embassy-signature/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-structure/metadata.xml b/sci-biology/embassy-structure/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-structure/metadata.xml +++ b/sci-biology/embassy-structure/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-topo/metadata.xml b/sci-biology/embassy-topo/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-topo/metadata.xml +++ b/sci-biology/embassy-topo/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-vienna/metadata.xml b/sci-biology/embassy-vienna/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy-vienna/metadata.xml +++ b/sci-biology/embassy-vienna/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy/metadata.xml b/sci-biology/embassy/metadata.xml index fbd4705346b4..e83d435707cb 100644 --- a/sci-biology/embassy/metadata.xml +++ b/sci-biology/embassy/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/emboss/metadata.xml b/sci-biology/emboss/metadata.xml index 8d209e2d5d8f..c94784a8eb04 100644 --- a/sci-biology/emboss/metadata.xml +++ b/sci-biology/emboss/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> EMBOSS is "The European Molecular Biology Open Software Suite". EMBOSS is a free Open Source software analysis package specially diff --git a/sci-biology/eugene/metadata.xml b/sci-biology/eugene/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/eugene/metadata.xml +++ b/sci-biology/eugene/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/exonerate/metadata.xml b/sci-biology/exonerate/metadata.xml index 711d805d77e7..6258e1d8b533 100644 --- a/sci-biology/exonerate/metadata.xml +++ b/sci-biology/exonerate/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>je_fro@gentoo.org</email> <name>Jeff Gardner</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> exonerate is a generic tool for pairwise sequence comparison </longdescription> diff --git a/sci-biology/express/metadata.xml b/sci-biology/express/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/express/metadata.xml +++ b/sci-biology/express/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/fasta/metadata.xml b/sci-biology/fasta/metadata.xml index b98c9919d241..eb1406f77657 100644 --- a/sci-biology/fasta/metadata.xml +++ b/sci-biology/fasta/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>je_fro@gentoo.org</email> <name>Jeff Gardner</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> </longdescription> </pkgmetadata> diff --git a/sci-biology/fasttree/metadata.xml b/sci-biology/fasttree/metadata.xml index 5ee1f51e55df..0c1572eed0f6 100644 --- a/sci-biology/fasttree/metadata.xml +++ b/sci-biology/fasttree/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="double-precision"> use double precision instead of single-precision floating point diff --git a/sci-biology/finchtv/metadata.xml b/sci-biology/finchtv/metadata.xml index e487463fc00b..53f5683fb440 100644 --- a/sci-biology/finchtv/metadata.xml +++ b/sci-biology/finchtv/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>je_fro@gentoo.org</email> <name>Jeff Gardner</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> A cross-platform graphical viewer for chromatogram files. </longdescription> diff --git a/sci-biology/foldingathome/metadata.xml b/sci-biology/foldingathome/metadata.xml index 63d767b84f60..93760f0c0505 100644 --- a/sci-biology/foldingathome/metadata.xml +++ b/sci-biology/foldingathome/metadata.xml @@ -1,9 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> <maintainer> <email>axs@gentoo.org</email> <name>Ian Stakenvicius</name> </maintainer> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> </pkgmetadata> diff --git a/sci-biology/gatk/metadata.xml b/sci-biology/gatk/metadata.xml index 154ecb1ad660..6c88340e4da5 100644 --- a/sci-biology/gatk/metadata.xml +++ b/sci-biology/gatk/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="github">broadgsa/gatk</remote-id> </upstream> diff --git a/sci-biology/gibbs/metadata.xml b/sci-biology/gibbs/metadata.xml index c31e2db70216..04b15c135918 100644 --- a/sci-biology/gibbs/metadata.xml +++ b/sci-biology/gibbs/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The Gibbs motif sampler stochastically examines candidate alignments in an effort to find the best alignment as measured by the maximum diff --git a/sci-biology/glimmer/metadata.xml b/sci-biology/glimmer/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/glimmer/metadata.xml +++ b/sci-biology/glimmer/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/glimmerhmm/metadata.xml b/sci-biology/glimmerhmm/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/glimmerhmm/metadata.xml +++ b/sci-biology/glimmerhmm/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gmap/metadata.xml b/sci-biology/gmap/metadata.xml index 7d62e2f44e07..75e4f21c5a7b 100644 --- a/sci-biology/gmap/metadata.xml +++ b/sci-biology/gmap/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="samtools">Enable support for samtools</flag> <flag name="goby">Enable support for goby</flag> diff --git a/sci-biology/goby-cpp/metadata.xml b/sci-biology/goby-cpp/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/goby-cpp/metadata.xml +++ b/sci-biology/goby-cpp/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/goby/metadata.xml b/sci-biology/goby/metadata.xml index 3bc02ac6b32e..09c094d65c32 100644 --- a/sci-biology/goby/metadata.xml +++ b/sci-biology/goby/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="cpp">Compile C/C++ API</flag> </use> diff --git a/sci-biology/hmmer/metadata.xml b/sci-biology/hmmer/metadata.xml index 66fa76626615..35f1aabfb0c6 100644 --- a/sci-biology/hmmer/metadata.xml +++ b/sci-biology/hmmer/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="pvm">Add support for parallel virtual machine (<pkg>sys-cluster/pvm</pkg>)</flag> diff --git a/sci-biology/iedera/metadata.xml b/sci-biology/iedera/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/iedera/metadata.xml +++ b/sci-biology/iedera/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/infernal/metadata.xml b/sci-biology/infernal/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/infernal/metadata.xml +++ b/sci-biology/infernal/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/iqpnni/metadata.xml b/sci-biology/iqpnni/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/iqpnni/metadata.xml +++ b/sci-biology/iqpnni/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/kalign/metadata.xml b/sci-biology/kalign/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/kalign/metadata.xml +++ b/sci-biology/kalign/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/lagan/metadata.xml b/sci-biology/lagan/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/lagan/metadata.xml +++ b/sci-biology/lagan/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/last/metadata.xml b/sci-biology/last/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/last/metadata.xml +++ b/sci-biology/last/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mafft/metadata.xml b/sci-biology/mafft/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/mafft/metadata.xml +++ b/sci-biology/mafft/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mammoth/metadata.xml b/sci-biology/mammoth/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/mammoth/metadata.xml +++ b/sci-biology/mammoth/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/maq/metadata.xml b/sci-biology/maq/metadata.xml index 79ebcc09421b..ad8c7ce46d3d 100644 --- a/sci-biology/maq/metadata.xml +++ b/sci-biology/maq/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">maq</remote-id> </upstream> diff --git a/sci-biology/maqview/metadata.xml b/sci-biology/maqview/metadata.xml index 79ebcc09421b..ad8c7ce46d3d 100644 --- a/sci-biology/maqview/metadata.xml +++ b/sci-biology/maqview/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">maq</remote-id> </upstream> diff --git a/sci-biology/mauve/metadata.xml b/sci-biology/mauve/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/mauve/metadata.xml +++ b/sci-biology/mauve/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mauvealigner/metadata.xml b/sci-biology/mauvealigner/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/mauvealigner/metadata.xml +++ b/sci-biology/mauvealigner/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mcl/metadata.xml b/sci-biology/mcl/metadata.xml index aa6527e1e839..10a66dc7fb52 100644 --- a/sci-biology/mcl/metadata.xml +++ b/sci-biology/mcl/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="blast"> add support for NCBI BLAST data diff --git a/sci-biology/meme/metadata.xml b/sci-biology/meme/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/meme/metadata.xml +++ b/sci-biology/meme/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mira/metadata.xml b/sci-biology/mira/metadata.xml index a2c7c1a0a6a7..c19aae1ceb3e 100644 --- a/sci-biology/mira/metadata.xml +++ b/sci-biology/mira/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">mira-assembler</remote-id> </upstream> diff --git a/sci-biology/mosaik/metadata.xml b/sci-biology/mosaik/metadata.xml index 4dfd5b0bdafa..aa553c40c0f8 100644 --- a/sci-biology/mosaik/metadata.xml +++ b/sci-biology/mosaik/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">mosaik-aligner</remote-id> </upstream> diff --git a/sci-biology/mothur/metadata.xml b/sci-biology/mothur/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/mothur/metadata.xml +++ b/sci-biology/mothur/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mrbayes/metadata.xml b/sci-biology/mrbayes/metadata.xml index 8a6a5b986dc7..261827941f1c 100644 --- a/sci-biology/mrbayes/metadata.xml +++ b/sci-biology/mrbayes/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> MrBayes is a program for the Bayesian estimation of phylogeny. Bayesian inference of phylogeny is based upon a quantity called the diff --git a/sci-biology/mummer/metadata.xml b/sci-biology/mummer/metadata.xml index f82b462e1f95..c8ed0daf6032 100644 --- a/sci-biology/mummer/metadata.xml +++ b/sci-biology/mummer/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">mummer</remote-id> </upstream> diff --git a/sci-biology/muscle/metadata.xml b/sci-biology/muscle/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/muscle/metadata.xml +++ b/sci-biology/muscle/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ncbi-tools/metadata.xml b/sci-biology/ncbi-tools/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/ncbi-tools/metadata.xml +++ b/sci-biology/ncbi-tools/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/newick-utils/metadata.xml b/sci-biology/newick-utils/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/newick-utils/metadata.xml +++ b/sci-biology/newick-utils/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/njplot/metadata.xml b/sci-biology/njplot/metadata.xml index 31592430880f..c8f187b0f040 100644 --- a/sci-biology/njplot/metadata.xml +++ b/sci-biology/njplot/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> NJplot is a tree drawing program able to draw any phylogenetic tree expressed in the Newick phylogenetic tree format (e.g., the format used diff --git a/sci-biology/pals/metadata.xml b/sci-biology/pals/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/pals/metadata.xml +++ b/sci-biology/pals/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/paml/metadata.xml b/sci-biology/paml/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/paml/metadata.xml +++ b/sci-biology/paml/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phrap/metadata.xml b/sci-biology/phrap/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/phrap/metadata.xml +++ b/sci-biology/phrap/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phred/metadata.xml b/sci-biology/phred/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/phred/metadata.xml +++ b/sci-biology/phred/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phylip/metadata.xml b/sci-biology/phylip/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/phylip/metadata.xml +++ b/sci-biology/phylip/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phyml/metadata.xml b/sci-biology/phyml/metadata.xml index d0355f85e406..8626055a85fb 100644 --- a/sci-biology/phyml/metadata.xml +++ b/sci-biology/phyml/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> Phyml is a simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Given input sequence files, it diff --git a/sci-biology/picard/metadata.xml b/sci-biology/picard/metadata.xml index 84dc21074bfa..0dbbc21cb0c0 100644 --- a/sci-biology/picard/metadata.xml +++ b/sci-biology/picard/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>ercpe@gentoo.org</email> <name>Johann Schmitz (ercpe)</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">picard</remote-id> </upstream> diff --git a/sci-biology/piler/metadata.xml b/sci-biology/piler/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/piler/metadata.xml +++ b/sci-biology/piler/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/pilercr/metadata.xml b/sci-biology/pilercr/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/pilercr/metadata.xml +++ b/sci-biology/pilercr/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/plink/metadata.xml b/sci-biology/plink/metadata.xml index 80af0e1d0365..d20429783580 100644 --- a/sci-biology/plink/metadata.xml +++ b/sci-biology/plink/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="webcheck"> add support for online update checking every time the program starts diff --git a/sci-biology/poa/metadata.xml b/sci-biology/poa/metadata.xml index 65027f64ec24..df5a71d4b3da 100644 --- a/sci-biology/poa/metadata.xml +++ b/sci-biology/poa/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">poamsa</remote-id> </upstream> diff --git a/sci-biology/prank/metadata.xml b/sci-biology/prank/metadata.xml index 2cd3c04eeca0..b78865c59707 100644 --- a/sci-biology/prank/metadata.xml +++ b/sci-biology/prank/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">prank-msa</remote-id> </upstream> diff --git a/sci-biology/primer3/metadata.xml b/sci-biology/primer3/metadata.xml index 1fbadfaf3b77..ffbf630ac6d9 100644 --- a/sci-biology/primer3/metadata.xml +++ b/sci-biology/primer3/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Primer3 picks primers for PCR reactions, considering: oligonucleotide melting temperature, size, GC content, and primer-dimer possibilities; diff --git a/sci-biology/prints/metadata.xml b/sci-biology/prints/metadata.xml index 7d2927f1d2fb..85aa23579473 100644 --- a/sci-biology/prints/metadata.xml +++ b/sci-biology/prints/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> A protein motif fingerprint database maintained at the University of Manchester. A fingerprint is a group of conserved motifs used to diff --git a/sci-biology/probcons/metadata.xml b/sci-biology/probcons/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/probcons/metadata.xml +++ b/sci-biology/probcons/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prodigal/metadata.xml b/sci-biology/prodigal/metadata.xml index 6e8b2ee66e66..6127cfce8631 100644 --- a/sci-biology/prodigal/metadata.xml +++ b/sci-biology/prodigal/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">prodigal</remote-id> </upstream> diff --git a/sci-biology/profphd/metadata.xml b/sci-biology/profphd/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/profphd/metadata.xml +++ b/sci-biology/profphd/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prosite/metadata.xml b/sci-biology/prosite/metadata.xml index 075d4b7bcf10..f4ae5f2f2357 100644 --- a/sci-biology/prosite/metadata.xml +++ b/sci-biology/prosite/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> A protein families and domains database maintained at the Swiss Institude for Bioinformatics. It consists of biologically significant diff --git a/sci-biology/psipred/metadata.xml b/sci-biology/psipred/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/psipred/metadata.xml +++ b/sci-biology/psipred/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/pysam/metadata.xml b/sci-biology/pysam/metadata.xml index 49afc3c3d532..b5ea8de18999 100644 --- a/sci-biology/pysam/metadata.xml +++ b/sci-biology/pysam/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">pysam</remote-id> </upstream> diff --git a/sci-biology/qrna/metadata.xml b/sci-biology/qrna/metadata.xml index d4648212cbad..71d4974b6dda 100644 --- a/sci-biology/qrna/metadata.xml +++ b/sci-biology/qrna/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/raxml/metadata.xml b/sci-biology/raxml/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/raxml/metadata.xml +++ b/sci-biology/raxml/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/readseq/metadata.xml b/sci-biology/readseq/metadata.xml index b198f044f3f5..c4ba5b442f03 100644 --- a/sci-biology/readseq/metadata.xml +++ b/sci-biology/readseq/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Reads and writes nucleic/protein sequences in various formats. Data files may have multiple sequences. diff --git a/sci-biology/rebase/metadata.xml b/sci-biology/rebase/metadata.xml index 734fcff7e215..00f4eff0230b 100644 --- a/sci-biology/rebase/metadata.xml +++ b/sci-biology/rebase/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The Restriction Enzyme data BASE is a collection of information about restriction enzymes and related proteins. It is maintained by New diff --git a/sci-biology/recon/metadata.xml b/sci-biology/recon/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/recon/metadata.xml +++ b/sci-biology/recon/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/repeatmasker-libraries/metadata.xml b/sci-biology/repeatmasker-libraries/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/repeatmasker-libraries/metadata.xml +++ b/sci-biology/repeatmasker-libraries/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/repeatmasker/metadata.xml b/sci-biology/repeatmasker/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/repeatmasker/metadata.xml +++ b/sci-biology/repeatmasker/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/rmblast/metadata.xml b/sci-biology/rmblast/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/rmblast/metadata.xml +++ b/sci-biology/rmblast/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/rnaview/metadata.xml b/sci-biology/rnaview/metadata.xml index b243b0c8da63..40b3de3cd5af 100644 --- a/sci-biology/rnaview/metadata.xml +++ b/sci-biology/rnaview/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The RNAView program generates 2-dimensional displays of RNA/DNA secondary structures with tertiary interactions. RNAView diff --git a/sci-biology/samtools/metadata.xml b/sci-biology/samtools/metadata.xml index 74dc02bc9826..0a1dbde36484 100644 --- a/sci-biology/samtools/metadata.xml +++ b/sci-biology/samtools/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">samtools</remote-id> </upstream> diff --git a/sci-biology/seaview/metadata.xml b/sci-biology/seaview/metadata.xml index 33794f43ab01..cd9ab1e768a8 100644 --- a/sci-biology/seaview/metadata.xml +++ b/sci-biology/seaview/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> SeaView is a graphical multiple sequence alignment editor developped by Manolo Gouy. SeaView is able to read and write various alignment diff --git a/sci-biology/seqan/metadata.xml b/sci-biology/seqan/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/seqan/metadata.xml +++ b/sci-biology/seqan/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/shrimp/metadata.xml b/sci-biology/shrimp/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/shrimp/metadata.xml +++ b/sci-biology/shrimp/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/sibsim4/metadata.xml b/sci-biology/sibsim4/metadata.xml index cfcd5be131d0..aa076ffc51a8 100644 --- a/sci-biology/sibsim4/metadata.xml +++ b/sci-biology/sibsim4/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">sibsim4</remote-id> </upstream> diff --git a/sci-biology/sim4/metadata.xml b/sci-biology/sim4/metadata.xml index ea9731279003..bda90bda309b 100644 --- a/sci-biology/sim4/metadata.xml +++ b/sci-biology/sim4/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> sim4 is a similarity-based tool for aligning an expressed DNA sequence (EST, cDNA, mRNA) with a genomic sequence for the gene. It also detects diff --git a/sci-biology/snpfile/metadata.xml b/sci-biology/snpfile/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/snpfile/metadata.xml +++ b/sci-biology/snpfile/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/stride/metadata.xml b/sci-biology/stride/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/stride/metadata.xml +++ b/sci-biology/stride/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/t-coffee/metadata.xml b/sci-biology/t-coffee/metadata.xml index 9a577185ee36..c3fee0cdc751 100644 --- a/sci-biology/t-coffee/metadata.xml +++ b/sci-biology/t-coffee/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence diff --git a/sci-biology/tophat/metadata.xml b/sci-biology/tophat/metadata.xml index 36cf4a138940..82e16023cf28 100644 --- a/sci-biology/tophat/metadata.xml +++ b/sci-biology/tophat/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="bam">Compile support for the BAM format</flag> </use> diff --git a/sci-biology/transfac/metadata.xml b/sci-biology/transfac/metadata.xml index d07df4fd4dbf..73322a777ed6 100644 --- a/sci-biology/transfac/metadata.xml +++ b/sci-biology/transfac/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> TRANSFAC® is a database of eukaryotic transcription factors, of their genomic binding sites and DNA-binding profiles. TRANSFAC 3.2 is an old diff --git a/sci-biology/tree-puzzle/metadata.xml b/sci-biology/tree-puzzle/metadata.xml index cbdeede346fa..2db6e8eb8fab 100644 --- a/sci-biology/tree-puzzle/metadata.xml +++ b/sci-biology/tree-puzzle/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> TREE-PUZZLE is a computer program to reconstruct phylogenetic trees from molecular sequence data by maximum likelihood. It implements a diff --git a/sci-biology/treeviewx/metadata.xml b/sci-biology/treeviewx/metadata.xml index e351ff6c1fa9..9a2171b2dfa3 100644 --- a/sci-biology/treeviewx/metadata.xml +++ b/sci-biology/treeviewx/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> TreeView X is a program for displaying phylogenetic trees on Linux and UNIX platforms. It can read and display NEXUS and Newick format tree diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/trf/metadata.xml +++ b/sci-biology/trf/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/trnascan-se/metadata.xml b/sci-biology/trnascan-se/metadata.xml index 55de1683677f..ec21c8b9a5fe 100644 --- a/sci-biology/trnascan-se/metadata.xml +++ b/sci-biology/trnascan-se/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> tRNAscan-SE detects ~99% of eukaryotic nuclear or prokaryotic tRNA genes, with a false positive rate of less than one per 15 gigabases, diff --git a/sci-biology/uchime/metadata.xml b/sci-biology/uchime/metadata.xml index a3c0f91c8a08..95ce07d46048 100644 --- a/sci-biology/uchime/metadata.xml +++ b/sci-biology/uchime/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> UCHIME is a new algorithm for detecting chimeric sequences. It was developed in collaboration with Brian Haas, Jose Carlos Clemente, Chris Quince and Rob diff --git a/sci-biology/ucsc-genome-browser/metadata.xml b/sci-biology/ucsc-genome-browser/metadata.xml index f1f3ccfb77e0..76c6964ed42c 100644 --- a/sci-biology/ucsc-genome-browser/metadata.xml +++ b/sci-biology/ucsc-genome-browser/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="server">Install genome browser Web application. If this flag is off, only libraries and utilities from the suite are installed.</flag> </use> diff --git a/sci-biology/unafold/metadata.xml b/sci-biology/unafold/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/unafold/metadata.xml +++ b/sci-biology/unafold/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/update-blastdb/metadata.xml b/sci-biology/update-blastdb/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/update-blastdb/metadata.xml +++ b/sci-biology/update-blastdb/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vaal/metadata.xml b/sci-biology/vaal/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/vaal/metadata.xml +++ b/sci-biology/vaal/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vcftools/metadata.xml b/sci-biology/vcftools/metadata.xml index c45e9f4dea06..0f9d97881e5b 100644 --- a/sci-biology/vcftools/metadata.xml +++ b/sci-biology/vcftools/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">vcftools</remote-id> </upstream> diff --git a/sci-biology/velvet/metadata.xml b/sci-biology/velvet/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/velvet/metadata.xml +++ b/sci-biology/velvet/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vienna-rna/metadata.xml b/sci-biology/vienna-rna/metadata.xml index 50f4e02d4a18..74cfe54c799e 100644 --- a/sci-biology/vienna-rna/metadata.xml +++ b/sci-biology/vienna-rna/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary diff --git a/sci-biology/wgs-assembler/metadata.xml b/sci-biology/wgs-assembler/metadata.xml index 8e4a74368071..3b4bdcaa7d30 100644 --- a/sci-biology/wgs-assembler/metadata.xml +++ b/sci-biology/wgs-assembler/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">wgs-assembler</remote-id> </upstream> diff --git a/sci-biology/wise/metadata.xml b/sci-biology/wise/metadata.xml index f17a827e3101..8b0589b27213 100644 --- a/sci-biology/wise/metadata.xml +++ b/sci-biology/wise/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/yass/metadata.xml b/sci-biology/yass/metadata.xml index e4a717e691b2..f2397a173c2a 100644 --- a/sci-biology/yass/metadata.xml +++ b/sci-biology/yass/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="dmalloc">Enable debugging with the dmalloc library</flag> <flag name="lowmem">Build for environments with low amounts of memory</flag> |