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* sci-biology/embassy-mse: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+31
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-meme: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+19
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-iprscan: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+17
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-hmmer: Port to emboss-r2.eclassDavid Seifert2017-02-193-0/+124
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-esim4: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+17
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-emnu: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+24
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-domsearch: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+17
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-domalign: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+17
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-domainatrix: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+17
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-clustalomega: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+19
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/embassy-cbstools: Port to emboss-r2.eclassDavid Seifert2017-02-192-0/+17
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* sci-biology/emboss: Port to emboss-r2.eclassDavid Seifert2017-02-191-0/+65
| | | | | Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
* emboss-r2.eclass: Make EAPI=6 only, simplifyDavid Seifert2017-02-191-0/+164
| | | | Closes: https://github.com/gentoo/gentoo/pull/3937
* app-text/a2ps: Remove oldAndreas K. Hüttel2017-02-191-140/+0
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/execnet: restrict test phaseMike Gilbert2017-02-191-0/+1
| | | | | | | Several tests are unreliable on amd64, and they segfault on alpha. Bug: https://bugs.gentoo.org/609520 Package-Manager: Portage-2.3.3_p56, Repoman-2.3.1_p49
* sci-mathematics/gfan: Remove EAPI 3 ebuildGerhard Bräunlich2017-02-191-34/+0
| | | | | Package-Manager: portage-2.3.3 Closes: https://github.com/gentoo/gentoo/pull/4031
* sci-mathematics/cado-nfs: Removing EAPI 4 ebuildsGerhard Bräunlich2017-02-195-155/+0
| | | | | Package-Manager: portage-2.3.3 Closes: https://github.com/gentoo/gentoo/pull/4030
* dev-scheme/guile: fix CFLAGS=-gddb3 build failure, bug#608190Sergei Trofimovich2017-02-191-0/+3
| | | | | | | | | | | | guile-snarf uses cpp to get rid of comments, #defines and type declarations in C code. But in -ggdb3 mode gcc leaves all of them in the output. The workaround is to downgrade -ggdb3 down to -ggdb2. Bug: https://bugs.gentoo.org/608190 Package-Manager: Portage-2.3.3, Repoman-2.3.1
* golang-base.eclass: raise go version to 1.7 for #607086William Hubbs2017-02-191-1/+1
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* dev-python/attrs: suppress too_slow health check on test_recurse_propertyMike Gilbert2017-02-192-0/+25
| | | | | Bug: https://bugs.gentoo.org/608570 Package-Manager: Portage-2.3.3_p56, Repoman-2.3.1_p49
* media-libs/jbig2dec: Add patch for CVE-2016-9601, bug 607188Andreas K. Hüttel2017-02-192-0/+946
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/pyopenssl: use pytest collectorMike Gilbert2017-02-191-1/+7
| | | | | | | | Also disable test_set_default_verify_paths, which requires network access. Bug: https://bugs.gentoo.org/601332 Package-Manager: Portage-2.3.3_p56, Repoman-2.3.1_p49
* dev-libs/beignet: require slot 0 of sys-devel/llvm and sys-devel/clangMarek Szuba2017-02-192-5/+5
| | | | | | | QA issues aside, at present Beignet doesn't support any version of LLVM newer than 3.9.x. Package-Manager: portage-2.3.3
* dev-libs/beignet: remove oldMarek Szuba2017-02-198-446/+0
| | | | Package-Manager: portage-2.3.3
* app-portage/porticron: 0.7.1Sebastian Pipping2017-02-192-0/+29
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/setuptools_scm: Install package for testingmaram2017-02-191-0/+1
| | | | | | The test suite fails unless the package is already installed. Bug: https://bugs.gentoo.org/show_bug.cgi?id=609648
* dev-lang/python: bump to 3.5.3Mike Gilbert2017-02-192-0/+365
| | | | Package-Manager: Portage-2.3.3_p56, Repoman-2.3.1_p49
* dev-lang/python: bump to 3.4.6Mike Gilbert2017-02-192-0/+359
| | | | Package-Manager: Portage-2.3.3_p56, Repoman-2.3.1_p49
* dev-lang/python: bump to 2.7.13Mike Gilbert2017-02-192-0/+363
| | | | Package-Manager: Portage-2.3.3_p56, Repoman-2.3.1_p49
* net-libs/openslp: Add patch for CVE-2016-7567, bug 595542Andreas K. Hüttel2017-02-192-0/+138
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-ml/ocamlgsl: Remove from treeDavid Seifert2017-02-195-88/+0
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* xfce-extra/xfce4-mount-plugin: Restore manifest change for metadata regenKent Fredric2017-02-201-0/+1
| | | | | | This is needed to update the actual dist manifest server side This reverts commit 041e66c4c71d45c5d8dcd491e5539ffc3550322a.
* xfce-extra/xfce4-mount-plugin: Revert manifest change for regenerationKent Fredric2017-02-201-1/+0
| | | | This reverts commit c8b755cc8a6cf03564318a20c8c45c28fc57f839.
* perl-core/{Digest,Term-ANSIColor,Test,Text-Balanced}: DekeywordKent Fredric2017-02-204-6/+6
| | | | | | | | | | | | These are no longer referred to by any virtuals, but may again be in future. Do not install these unless you want to have problems. These are mostly kept here to avoid needless metadata churn and to avoid spurious last-riting. Package-Manager: Portage-2.3.3, Repoman-2.3.1
* virtual/perl-*: -r bump for rdep propagationKent Fredric2017-02-2020-0/+0
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* virtual/perl-*: Remove dependency on dev-lang/perl-5.20*Kent Fredric2017-02-2020-21/+21
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-lang/perl, virtual/perl-*: Cleanup 5.20* and eblits re bug #589680 and ↵Kent Fredric2017-02-2083-2468/+0
| | | | | | | | | bug #586418 Bug: https://bugs.gentoo.org/586418 Bug: https://bugs.gentoo.org/589680 Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-perl/PPIx-Regexp: Bump to version 0.51.0Kent Fredric2017-02-202-0/+29
| | | | | | | | | | | | | Upstream: - Make perl_version_removed more robust against delimiters() being undef. - Fix parsing embedded comments in bracketed substitution - postderef defaults to true - Parse unterminated s// as unknown token instead of exception - Error when parsing /\b{/ - Support [] whitespace with /xx Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-perl/Email-MIME: Bump to version 1.940.0Kent Fredric2017-02-203-0/+38
| | | | | | | | | | | | | | | | | | | | | | - Add github remote id Upstream: - Pass all args to ->header to header_str - Guard eval calls in narrower scope - Remove unused private _address_encode method - Use case-insensitive header decoding routines - Ensure MIME header encoding when a value contains non-ascii, "=?", sequences of 78 or more non-whitespace characters, or leading whitespace - first line of string generated by mime_encode() is now ensured to be less than 76 characters (including the header itself) to avoid premature folding. - Remove redundant private functions - Warn when multipart messages are erroneously advertised as single part, and then upgrade to multipart. - Do not decode headers that are known not to need it Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-lang/php: restore php-7.0.15 temporarily.Michael Orlitzky2017-02-192-0/+744
| | | | | | | | | | | | | Due to a getrandom() detection bug, php-7.0.16 doesn't work with older pre-3.17 Linux kernels. Let's put 7.0.15 back until that is resolved. The best reference I have at the moment is the discussion on the upstream commit: https://github.com/php/php-src/commit/14c72cc5824d5fa472b79b7216a01be0918ccc5d Gentoo-Bug: 574238 Package-Manager: portage-2.3.3
* app-editors/emacs: Fix compilation with glibc-2.24.Ulrich Müller2017-02-192-0/+347
| | | | | | Bug: 602992 Package-Manager: Portage-2.3.3, Repoman-2.3.1
* app-accessibility/simon: DEPEND on qwt[qt4]Andreas Sturmlechner2017-02-191-2/+2
| | | | Package-Manager: portage-2.3.3
* sci-geosciences/qgis: Drop oldAndreas Sturmlechner2017-02-194-579/+0
| | | | Package-Manager: portage-2.3.3
* sci-geosciences/qgis: Fix QtWebKit automagicAndreas Sturmlechner2017-02-192-0/+302
| | | | | | | | | Cleanup DEPENDs and src_configure. Gentoo-bug: 609148 Reported-by: Luis Ressel <aranea@aixah.de> Package-Manager: portage-2.3.3
* dev-python/ssl-fetch: Bump to EAPI=6 and git-r3.eclassJustin Lecher2017-02-191-8/+7
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sys-kernel/aufs-sources: Bump to latest genpatches and linux releaseJustin Lecher2017-02-195-0/+348
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/chemical-mime-data: Drop unnecessary USE depJustin Lecher2017-02-191-1/+1
| | | | | | | Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=609560 Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-libs/arpack: Drop oldJustin Lecher2017-02-192-64/+0
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* xfce-extra/xfce4-mount-plugin: Add missing ebuild for 1.1.1Michał Górny2017-02-191-0/+26
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* dev-ruby/slim: loosen dependency on templeHans de Graaff2017-02-191-0/+51
| | | | Package-Manager: portage-2.3.3