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* */*: Normalize metadata.xml filesMichał Górny2021-03-1613-13/+12
| | | | | | | | | | | Normalize quoting, replace '>' with entities, replace unnecessary entities, remove trailing empty lines. Done via: find -name metadata.xml -exec xml ed -P -L -d //none {} + Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/lapack: add github remote-idSam James2021-03-151-0/+3
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/votca-tools: disable mkl (bug #776319)Christoph Junghans2021-03-151-0/+1
| | | | | | Closes: https://bugs.gentoo.org/776319 Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/libint: fix install of static libs (bug #776256)Christoph Junghans2021-03-141-1/+4
| | | | | | Closes: https://bugs.gentoo.org/776256 Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/libint: enable shared libsChristoph Junghans2021-03-142-0/+64
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/votca-tools: version bumpChristoph Junghans2021-03-143-3/+45
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/mc: Port to EAPI 7David Seifert2021-03-131-39/+37
| | | | | Package-Manager: Portage-3.0.17, Repoman-3.0.2 Signed-off-by: David Seifert <soap@gentoo.org>
* Reverts: efc78ff95f89db0e7c2400c72a4d819976c3df0dDavid Seifert2021-03-132-0/+27
| | | | | | * Still needed by sci-libs/vtk Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/punc: Port to EAPI 7David Seifert2021-03-131-38/+33
| | | | | Package-Manager: Portage-3.0.17, Repoman-3.0.2 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/gamer: Port to EAPI 7David Seifert2021-03-131-29/+30
| | | | | Package-Manager: Portage-3.0.17, Repoman-3.0.2 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/gts: port to EAPI 7, fix docsIonen Wolkens2021-03-133-80/+69
| | | | | | | | | | | | | * Updated autotools patch: - p0 -> p1 and metadata removal - removed bits that were meant to support out-of-source (unused) * Removed USE=examples (small files, now installed by default) Closes: https://github.com/gentoo/gentoo/pull/19693 Closes: https://bugs.gentoo.org/727536 Package-Manager: Portage-3.0.15, Repoman-3.0.2 Signed-off-by: Ionen Wolkens <sudinave@gmail.com> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/netcdf-cxx: Remove old 4.2-r300David Seifert2021-03-132-27/+0
| | | | | Package-Manager: Portage-3.0.17, Repoman-3.0.2 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/symengine: add 0.7.0Sam James2021-03-133-0/+112
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/armadillo: Version bump 10.3.0Andreas K. Hüttel2021-03-132-0/+149
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/levmar: drop oldDennis Lamm2021-03-121-48/+0
| | | | | | | Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org> Package-Manager: Portage-3.0.13, Repoman-3.0.2 Closes: https://github.com/gentoo/gentoo/pull/19887 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org>
* sci-libs/levmar: EAPI-7 bumpDennis Lamm2021-03-122-1/+50
| | | | | | | Closes: https://bugs.gentoo.org/770598 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org> Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org>
* sci-libs/gdal: actually fix autoconf 2.70+Sam James2021-03-111-1/+1
| | | | | | | | Was confused by having not depcleaned, so didn't test previous fix with autoconf 2.70. Closes: https://bugs.gentoo.org/775209 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: fix autoconf 2.70+Sam James2021-03-111-0/+4
| | | | | Closes: https://bugs.gentoo.org/775209 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add 3.2.2, add CPU_FLAGS_X86_*Sam James2021-03-112-0/+313
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: update libdir patch (again)Sam James2021-03-091-1/+1
| | | | | | Missed one 'lib'. Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: update older patch metadataSam James2021-03-092-5/+5
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add bug reference to commentSam James2021-03-091-0/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: adjust pathsSam James2021-03-091-10/+10
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: remove some patch metadataSam James2021-03-091-26/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: update libdir patch slightlySam James2021-03-091-71/+95
| | | | | | | | * Removed more obsolete libproj logic/checks * Fix json-c too Bug: https://bugs.gentoo.org/696106 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add link to upstream PRSam James2021-03-091-0/+2
| | | | | Bug: https://bugs.gentoo.org/696106 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: respect libdirSam James2021-03-092-2/+416
| | | | | | | | | | | | | | | To be upstreamed. Unfortunately, we can't do *everything* required in Gentoo in the patch, as there's a --with-local argument which I'd prefer to get rid of, but is a bit too invasive of a change for me to want to push upstream for now. So, we settle on a single sed in the ebuild, which is an improvement! Closes: https://bugs.gentoo.org/696106 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: Stabilize 3.9.0-r2 arm, #770094Sam James2021-03-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/indilib: stabilize 1.8.8 on ppcJoonas Niilola2021-03-071-1/+1
| | | | | | Bug: https://bugs.gentoo.org/753953 Bug: https://bugs.gentoo.org/753137 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/shapely: fixed failing tests with geos 3.9Dennis Lamm2021-03-062-0/+102
| | | | | | | | | | Related Upsteam Issue: https://github.com/Toblerity/Shapely/issues/1079 Bug: https://bugs.gentoo.org/765745 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org> Package-Manager: Portage-3.0.13, Repoman-3.0.2 Closes: https://github.com/gentoo/gentoo/pull/19797 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org>
* sci-libs/neartree: EAPI-7 bump, use cmake.eclass, use GNUInstallDirsAndreas Sturmlechner2021-03-062-19/+15
| | | | | | | | Drop superfluous src_configure. Drop superfluous IUSE="static-libs". Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/clapack: https, cmake.eclass, EAPI-7 bumpAndreas Sturmlechner2021-03-061-12/+14
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/cminpack: Drop 1.3.5Andreas Sturmlechner2021-03-063-45/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/cminpack: 1.3.8 version bump, EAPI-7, cmake.eclassAndreas Sturmlechner2021-03-063-0/+46
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/voro++: EAPI-7 bump, use cmake.eclass, use GNUInstallDirsAndreas Sturmlechner2021-03-062-60/+15
| | | | | | | | | | | | Raise cmake minimum to 3.0 for future compatibility. Rename duplicate 'help' custom target to fix build with ninja. Drop wholly unnecessary uninstall part from CMakeLists.txt. Simplify ebuild. ...45 lines saved! Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/lmfit: Use cmake.eclass/EAPI-7, fix patch, fix HOMEPAGEAndreas Sturmlechner2021-03-062-8/+7
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/libspatialindex: fixed werrorDennis Lamm2021-03-062-0/+49
| | | | | | | | | | Using system provided gtest instead of bundled one Closes: https://bugs.gentoo.org/show_bug.cgi?id=764305 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org> Package-Manager: Portage-3.0.13, Repoman-3.0.2 Closes: https://github.com/gentoo/gentoo/pull/19791 Signed-off-by: Dennis Lamm <expeditioneer@gentoo.org>
* sci-libs/netcdf-cxx: Keyword 4.3.1 arm64, #772782Sam James2021-03-061-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/indilib: 1.8.9 version bumpAndreas Sturmlechner2021-03-052-0/+57
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/indilib: Drop 1.8.7Andreas Sturmlechner2021-03-052-57/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/indilib: stabilize 1.8.8 on ppc64Joonas Niilola2021-03-051-1/+1
| | | | | | Bug: https://bugs.gentoo.org/753137 Bug: https://bugs.gentoo.org/753953 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/mpir: Drop 2.6.0-r2, EAPI5--Andreas Sturmlechner2021-03-056-369/+0
| | | | | | Closes: https://bugs.gentoo.org/679338 Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/coinor-couenne: add missing ipopt[lapack] USE depIonen Wolkens2021-03-031-1/+1
| | | | | | | | Closes: https://bugs.gentoo.org/774000 Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Ionen Wolkens <sudinave@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/19740 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/geos: BumpPatrick Lauer2021-03-022-0/+41
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Patrick Lauer <patrick@gentoo.org>
* sci-libs/armadillo: Remove oldJakov Smolic2021-03-024-316/+18
| | | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Closes: https://github.com/gentoo/gentoo/pull/19731 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/armadillo: Stabilize 10.2.0 x86, #770628Sam James2021-03-021-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/armadillo: Stabilize 10.2.0 amd64, #770628Sam James2021-03-021-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/armadillo: Stabilize 10.2.0 ppc64, #770628Sam James2021-03-021-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: add github remote-idSam James2021-03-021-0/+3
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: drop vestigal static-libsSam James2021-03-021-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>