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# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
PYTHON_COMPAT=( python3_{8..10} )
PYTHON_REQ_USE="threads(+)"
MY_PN=tables
MY_P=${MY_PN}-${PV}
inherit distutils-r1
DESCRIPTION="Hierarchical datasets for Python"
HOMEPAGE="https://www.pytables.org/"
SRC_URI="mirror://pypi/${MY_PN:0:1}/${MY_PN}/${MY_P}.tar.gz"
S="${WORKDIR}/${MY_P}"
LICENSE="BSD"
SLOT="0"
KEYWORDS="amd64 arm arm64 ~hppa ~ia64 ppc ppc64 ~riscv ~s390 ~sparc x86 ~amd64-linux ~x86-linux"
IUSE="doc examples test"
RESTRICT="!test? ( test )"
# See https://github.com/PyTables/PyTables/issues/912 for hdf5 upper bound
DEPEND="
app-arch/bzip2:0=
app-arch/lz4:0=
>=app-arch/zstd-1.0.0:=
>=dev-libs/c-blosc-1.11.1:0=
dev-libs/lzo:2=
>=dev-python/numpy-1.8.1[${PYTHON_USEDEP}]
<sci-libs/hdf5-1.12:=
"
RDEPEND="${DEPEND}
>=dev-python/numexpr-2.5.2[${PYTHON_USEDEP}]
dev-python/six[${PYTHON_USEDEP}]"
BDEPEND="
>=dev-python/cython-0.21[${PYTHON_USEDEP}]
virtual/pkgconfig
test? (
dev-python/mock[${PYTHON_USEDEP}]
${RDEPEND}
)
"
DOCS=( RELEASE_NOTES.txt THANKS )
PATCHES=(
"${FILESDIR}"/${P}-numpy-float.patch
"${FILESDIR}"/${P}-py310.patch
"${FILESDIR}"/${PN}-3.6.1-big-endian-tests-skip-subset.patch
)
python_prepare_all() {
export {BLOSC,BZIP2,LZO,HDF5}_DIR="${ESYSROOT}"/usr
export PYTABLES_NO_EMBEDDED_LIBS=1
export USE_PKGCONFIG=TRUE
rm tables/*.c || die
sed -e "s:/usr:${EPREFIX}/usr:g" \
-i setup.py || die
rm -r c-blosc/{blosc,internal-complibs} || die
sed -i -e '/_version/ s/\\s\*/\\s\+/' setup.py || die
distutils-r1_python_prepare_all
}
python_compile() {
distutils-r1_python_compile -j1
}
python_test() {
cd "${BUILD_DIR}"/lib* || die
"${EPYTHON}" tables/tests/test_all.py -v || die
}
python_install_all() {
if use doc; then
DOCS+=( doc/scripts )
fi
distutils-r1_python_install_all
if use examples; then
dodoc -r examples
dodoc -r contrib
docompress -x /usr/share/doc/${PF}/examples
docompress -x /usr/share/doc/${PF}/contrib
fi
}
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