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# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
inherit toolchain-funcs
DESCRIPTION="Protein sequences and profiles comparison"
HOMEPAGE="http://www.well.ox.ac.uk/ariadne/"
SRC_URI="http://www.well.ox.ac.uk/${PN}/${P}.tar.Z"
LICENSE="ARIADNE"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="static-libs"
DEPEND=">=sci-biology/ncbi-tools-0.20041020-r1"
RDEPEND="${DEPEND}"
S=${WORKDIR}/SRC-${PV}
PATCHES=(
"${FILESDIR}"/${P}-gcc4.patch
"${FILESDIR}"/${P}-implicits.patch
)
src_prepare() {
default
sed -i -e "s/\$(CFLAGS)/\$(LDFLAGS) &/" Makefile || die #359045
sed -e "s/blosum62/BLOSUM62/" -i prospero.c || die
}
src_compile() {
emake CC="$(tc-getCC)" OPTIMISE="${CFLAGS}"
}
src_install() {
dobin Linux/{ariadne,prospero}
use static-libs && dolib.a Linux/libseq.a
insinto /usr/include/${PN}
doins Include/*.h
einstalldocs
}
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