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# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=2
MY_P="${P}a"
DESCRIPTION="Utilities for analysing and manipulating the SAM/BAM alignment formats"
HOMEPAGE="http://samtools.sourceforge.net/"
SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.bz2"
LICENSE="MIT"
SLOT="0"
IUSE=""
KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
S="${WORKDIR}/${MY_P}"
src_prepare() {
sed -i 's/^CFLAGS=/CFLAGS+=/' "${S}"/{Makefile,misc/Makefile}
}
src_install() {
dobin samtools || die
dobin $(find misc -type f -executable) || die
insinto /usr/share/${PN}
doins -r examples || die
doman ${PN}.1 || die
dodoc AUTHORS ChangeLog NEWS
}
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