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| author |   Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 13:49:04 -0700 |
|---|---|---|
| committer | Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 17:38:18 -0700 |
| commit | 56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch) | |
| tree | 3f91093cdb475e565ae857f1c5a7fd339e2d781e /sci-biology/trf | |
| download | gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.gz gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.bz2 gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.zip | |
proj/gentoo: Initial commit
This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.
This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.
Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'sci-biology/trf')
| -rw-r--r-- | sci-biology/trf/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/trf/metadata.xml | 5 | ||||
| -rw-r--r-- | sci-biology/trf/trf-4.04.ebuild | 37 |
3 files changed, 43 insertions, 0 deletions
diff --git a/sci-biology/trf/Manifest b/sci-biology/trf/Manifest new file mode 100644 index 000000000000..621d293009ea --- /dev/null +++ b/sci-biology/trf/Manifest @@ -0,0 +1 @@ +DIST trf404.linux 89853 SHA256 1b9e3917088684afc2287a078810858f7a8e50d90e7bad2d814d40dc24188058 SHA512 c1aa05e394d47ea153df3082258f9a089aa59976963e9ac5d5816ef9dcd95c47e2e46861d1b2aae52b5ea9950a823a2449dd0d8426b04f2b738f5552c319393e WHIRLPOOL 7817c7eeb2c452ece7f71c2b7548fd9cda8c6796d5e77b2de46911f50bb271290b1a9601545efc50b94574c718e0e5e65d4a4e27f5cfd66c3590e9d5b7c5856c diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml new file mode 100644 index 000000000000..f17a827e3101 --- /dev/null +++ b/sci-biology/trf/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> +</pkgmetadata> diff --git a/sci-biology/trf/trf-4.04.ebuild b/sci-biology/trf/trf-4.04.ebuild new file mode 100644 index 000000000000..81d540251f07 --- /dev/null +++ b/sci-biology/trf/trf-4.04.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +inherit eutils + +MY_P="${PN}404" + +DESCRIPTION="Tandem Repeats Finder" +HOMEPAGE="http://tandem.bu.edu/trf/trf.html" +SRC_URI="http://tandem.bu.edu/trf/downloads/${MY_P}.linux" + +LICENSE="trf" # http://tandem.bu.edu/trf/trf.license.html +SLOT="0" +KEYWORDS="amd64 x86" +RESTRICT="mirror bindist" + +S="${WORKDIR}" + +QA_PREBUILT="opt/${PN}/.*" + +src_unpack() { + cp "${DISTDIR}/${MY_P}.linux" "${S}/${MY_P}.linux.exe" || die +} + +src_install() { + exeinto /opt/${PN} + doexe trf404.linux.exe + dosym /opt/${PN}/${MY_P}.linux.exe /opt/bin/trf + # GTK version (http://tandem.bu.edu/trf/downloads/trf400.linuxgtk.exe) has broken linking + #if use gtk; then + # doexe trf400.linuxgtk.exe || die + # make_desktop_entry /opt/${PN}/trf400.linuxgtk.exe "Tandem Repeats Finder" || die + #fi +} |