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Diffstat (limited to 'sci-chemistry/ccp4i/files/6.1.3-rename-rapper.patch')
-rw-r--r--sci-chemistry/ccp4i/files/6.1.3-rename-rapper.patch61
1 files changed, 61 insertions, 0 deletions
diff --git a/sci-chemistry/ccp4i/files/6.1.3-rename-rapper.patch b/sci-chemistry/ccp4i/files/6.1.3-rename-rapper.patch
new file mode 100644
index 000000000000..9f5cfb4b635f
--- /dev/null
+++ b/sci-chemistry/ccp4i/files/6.1.3-rename-rapper.patch
@@ -0,0 +1,61 @@
+diff --git a/ccp4i/scripts/check.script b/ccp4i/scripts/check.script
+index def44bc..dd4bb7e 100755
+--- a/ccp4i/scripts/check.script
++++ b/ccp4i/scripts/check.script
+@@ -24,7 +24,7 @@
+ if $RUN_RAMPAGE {
+
+ # Generate command line
+- set cmd "[BinPath rapper]"
++ set cmd "[BinPath rappermc]"
+
+ set rapperdatadir [FileJoin [GetEnvPath CCP4] share rapper]
+ set paramsfile [FileJoin $rapperdatadir params.xml]
+diff --git a/ccp4i/scripts/rapper.script b/ccp4i/scripts/rapper.script
+index cdae1e2..faae226 100755
+--- a/ccp4i/scripts/rapper.script
++++ b/ccp4i/scripts/rapper.script
+@@ -17,7 +17,7 @@
+
+ #set up command line
+
+-set cmd "[BinPath rapper]"
++set cmd "[BinPath rappermc]"
+
+ set rapperdatadir [FileJoin [GetEnvPath CCP4] share rapper]
+ set paramsfile [FileJoin [GetEnvPath CCP4] share rapper params.xml]
+@@ -180,7 +180,7 @@ append outfiles " $XYZOUT PROJECT"
+
+ # Run RAPPER to join loop back to framework and out put to defined pdb file
+ # Also need to sort out multimodel files join - FIX ME
+-set cmd2 "[BinPath rapper]"
++set cmd2 "[BinPath rappermc]"
+ append cmd2 " $paramsfile joinpdb "
+ append cmd2 " --pdb2 \"$root\-loop.pdb\" "
+ append cmd2 " --pdb \"$root\-framework.pdb\" "
+diff --git a/ccp4i/tasks/check.tcl b/ccp4i/tasks/check.tcl
+index ae88ff2..ee3307b 100755
+--- a/ccp4i/tasks/check.tcl
++++ b/ccp4i/tasks/check.tcl
+@@ -46,7 +46,7 @@ proc check_run { arrayname } {
+ # Check for Rampage program. If it is not found, we switch off the option.
+ # If it was the only option, script will fail with next check.
+ if { $array(RUN_RAMPAGE) == 1 } {
+- if { [FindExecutable "rapper"] == "" } {
++ if { [FindExecutable "rappermc"] == "" } {
+ WarningMessage "Input Error: Rapper_Rampage program not found in system path."
+ set array(RUN_RAMPAGE) 0
+ }
+diff --git a/ccp4i/tasks/rapper.tcl b/ccp4i/tasks/rapper.tcl
+index e299057..8843a3f 100755
+--- a/ccp4i/tasks/rapper.tcl
++++ b/ccp4i/tasks/rapper.tcl
+@@ -28,7 +28,7 @@ proc rapper_run { arrayname } {
+ # Check for RAPPER program. If it is not found, we switch off the option.
+ # If it was the only option, script will fail with next check.
+ if { [regexp MODEL $build_type ] && $prog_type == "RAPPER"} {
+- if { [FindExecutable "rapper"] == "" } {
++ if { [FindExecutable "rappermc"] == "" } {
+ WarningMessage "Input Error: RAPPER program not found in system path."
+ set build_type 0
+ }