diff options
Diffstat (limited to 'sci-chemistry/procheck/procheck-3.5.4-r2.ebuild')
-rw-r--r-- | sci-chemistry/procheck/procheck-3.5.4-r2.ebuild | 88 |
1 files changed, 88 insertions, 0 deletions
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r2.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r2.ebuild new file mode 100644 index 000000000000..0c4683e03a72 --- /dev/null +++ b/sci-chemistry/procheck/procheck-3.5.4-r2.ebuild @@ -0,0 +1,88 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit eutils fortran-2 multilib toolchain-funcs versionator + +DESCRIPTION="Checks the stereochemical quality of a protein structure" +HOMEPAGE="http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html" +SRC_URI=" + ${P}.tar.gz ${P}-README + doc? ( ${P}-manual.tar.gz )" + +LICENSE="procheck" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="doc" + +RDEPEND="app-shells/tcsh" +DEPEND="${RDEPEND}" + +RESTRICT="fetch" + +S="${WORKDIR}/${PN}" + +pkg_nofetch() { + elog "Please visit http://www.ebi.ac.uk/thornton-srv/software/PROCHECK/download.html" + elog "And follow the instruction for downloading." + elog "Files should be stored in following way" + elog "${PN}.tar.gz -> ${DISTDIR}/${P}.tar.gz" + elog "README -> ${DISTDIR}/${P}-README" + use doc && elog "manual.tar.gz -> ${DISTDIR}/${P}-manual.tar.gz" +} + +src_prepare() { + epatch \ + "${FILESDIR}"/${PV}-ldflags.patch \ + "${FILESDIR}"/${P}-close.patch +} + +src_compile() { + emake \ + F77=$(tc-getFC) \ + CC=$(tc-getCC) \ + COPTS="${CFLAGS}" \ + FOPTS="${FFLAGS} -std=legacy" +} + +src_install() { + for i in *.scr; do + newbin ${i} ${i%.scr} + done + + exeinto /usr/libexec/${PN}/ + doexe \ + anglen \ + clean \ + rmsdev \ + secstr \ + gfac2pdb \ + pplot \ + bplot \ + tplot \ + mplot \ + vplot \ + viol2pdb \ + wirplot \ + nb + dodoc "${DISTDIR}"/${P}-README + + insinto /usr/libexec/${PN}/ + doins *.dat *.prm + newins resdefs.dat resdefs.data + + cat >> "${T}"/30${PN} <<- EOF + prodir="${EPREFIX}/usr/libexec/${PN}/" + EOF + + doenvd "${T}"/30${PN} + + if use doc; then + pushd "${WORKDIR}" > /dev/null + docinto html + dodoc -r manual + popd > /dev/null + fi +} |