diff options
Diffstat (limited to 'sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch')
| -rw-r--r-- | sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch | 74 |
1 files changed, 74 insertions, 0 deletions
diff --git a/sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch b/sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch new file mode 100644 index 000000000000..a6eeabfdf46c --- /dev/null +++ b/sci-biology/fasta/files/fasta-36.3.5e-ldflags.patch @@ -0,0 +1,74 @@ + make/Makefile.pcom | 8 ++++---- + make/Makefile.pcom_s | 8 ++++---- + make/Makefile.pcom_t | 8 ++++---- + 3 files changed, 12 insertions(+), 12 deletions(-) + +diff --git a/make/Makefile.pcom b/make/Makefile.pcom +index 9c5f801..33fc001 100644 +--- a/make/Makefile.pcom ++++ b/make/Makefile.pcom +@@ -209,14 +209,14 @@ print_pssm : print_pssm.c getseq.c karlin.c apam.c + $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c $(LIB_M) + + map_db : map_db.c uascii.h ncbl2_head.h +- $(CC) $(CFLAGS) -o $(BIN)/map_db map_db.c ++ $(CC) $(CFLAGS) $(HFLAGS) $(BIN)/map_db map_db.c + + list_db : list_db.c +- $(CC) $(CFLAGS) -o $(BIN)/list_db list_db.c ++ $(CC) $(CFLAGS) $(HFLAGS) $(BIN)/list_db list_db.c + + + lav2ps : lav2plt.o lavplt_ps.o +- $(CC) -DUNIX -o $(BIN)/lav2ps lav2plt.o lavplt_ps.o -lm ++ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2ps lav2plt.o lavplt_ps.o -lm + + lav2svg : lav2plt.o lavplt_svg.o +- $(CC) -DUNIX -o $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm ++ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm +diff --git a/make/Makefile.pcom_s b/make/Makefile.pcom_s +index dc53001..8a45044 100644 +--- a/make/Makefile.pcom_s ++++ b/make/Makefile.pcom_s +@@ -143,14 +143,14 @@ print_pssm : print_pssm.c getseq.c karlin.c apam.c + $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c $(LIB_M) + + map_db : map_db.c uascii.h ncbl2_head.h +- $(CC) $(CFLAGS) -o $(BIN)/map_db map_db.c ++ $(CC) $(CFLAGS) $(HFLAGS) $(BIN)/map_db map_db.c + + list_db : list_db.c +- $(CC) $(CFLAGS) -o $(BIN)/list_db list_db.c ++ $(CC) $(CFLAGS) $(HFLAGS) $(BIN)/list_db list_db.c + + + lav2ps : lav2plt.o lavplt_ps.o +- $(CC) -DUNIX -o $(BIN)/lav2ps lav2plt.o lavplt_ps.o -lm ++ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2ps lav2plt.o lavplt_ps.o -lm + + lav2svg : lav2plt.o lavplt_svg.o +- $(CC) -DUNIX -o $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm ++ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm +diff --git a/make/Makefile.pcom_t b/make/Makefile.pcom_t +index 8a71438..5b08a50 100644 +--- a/make/Makefile.pcom_t ++++ b/make/Makefile.pcom_t +@@ -164,14 +164,14 @@ print_pssm : print_pssm.c getseq.c karlin.c apam.c + $(CC) -o print_pssm $(CFLAGS) print_pssm.c getseq.c karlin.c apam.c $(LIB_M) + + map_db : map_db.c uascii.h ncbl2_head.h +- $(CC) $(CFLAGS) -o $(BIN)/map_db map_db.c ++ $(CC) $(CFLAGS) $(HFLAGS) $(BIN)/map_db map_db.c + + list_db : list_db.c +- $(CC) $(CFLAGS) -o $(BIN)/list_db list_db.c ++ $(CC) $(CFLAGS) $(HFLAGS) $(BIN)/list_db list_db.c + + + lav2ps : lav2plt.o lavplt_ps.o +- $(CC) -DUNIX -o $(BIN)/lav2ps lav2plt.o lavplt_ps.o -lm ++ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2ps lav2plt.o lavplt_ps.o -lm + + lav2svg : lav2plt.o lavplt_svg.o +- $(CC) -DUNIX -o $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm ++ $(CC) -DUNIX $(HFLAGS) $(BIN)/lav2svg lav2plt.o lavplt_svg.o -lm |